Zhang, Y., Cheng L., Tolonen K.E., Yin H.,Gao J., Zhang Z., Li K., Cai Y. (2018) Substrate degradation and nutrient enrichment structuring macroinvertebrate assemblages in agriculturally dominated Lake Chaohu Basins, China. Science of The Total Environment 627: 57-66.

Tolonen, K.T., Cai, Y., Vilmi, A., Karjalainen, S.M., Sutela, T. & Heino, J. (2018) Environmental filtering and spatial effects on metacommunity organisation differ among littoral macroinvertebrate groups deconstructed by biological traits. Aquatic Ecology 52: 119-131.

Rocha, M.P., Bini, L.M., Siqueira, T., Hjort, J., Grönroos, M., Lindholm, M., Karjalainen, S.M. & Heino, J. (2018) Predicting occupancy and abundance by niche position, niche breadth and body size in stream organisms. Oecologia 186: 205-216.

Tolonen, K.E., Leinonen, K., Erkinaro, J. & Heino, J. (2018) Ecological uniqueness of macroinvertebrate communities in high-latitude streams is a consequence of deterministic environmental filtering processes. Aquatic Ecology 52: 17-33.

Cai, Y., Xu, H., Vilmi, A., Tolonen, K.T., Tang, X., Qin, B., Gong, Z. & Heino, J. (2017) Relative roles of spatial processes, natural factors and anthropogenic stressors in structuring a lake macroinvertebrate metacommunity. Science of the Total Environment 601: 1702-1711.

Tolonen, K.T., Vilmi, A., Karjalainen, S.M., Hellsten, S. & Heino J. (2017) Do different facets of littoral macroinvertebrate diversity show congruent patterns in a large lake system? Community Ecology 18: 109-116.

Vilmi, A., Karjalainen, S.M. & Heino, J. (2017) Ecological uniqueness of stream and lake diatom communities shows different macroecological patterns. Diversity and Distributions 23: 1042-1053.

Rocha, M.P., Heino, J., Velho, L.F.M., Lansac-Tôha, F.M. & Lansac-Tôha, F.A. (2017) Fine spatial grain, large spatial extent and biogeography of macrophyte-associated cladoceran communities across Neotropical floodplains. Freshwater Biology 62: 559-569.

Vilmi, A., Alahuhta, J., Hjort, J., Kärnä, O.-M., Leinonen, K., Rocha, M.P., Tolonen, K.E., Tolonen, K.T. & Heino, J. (2017) Geography of global change and species richness in the North. Environmental Reviews 25: 184-192.

Langenheder, S., Wang, J., Karjalainen, S.M., Laamanen, T., Tolonen, K.T., Vilmi, A. & Heino, J. (2017) Bacterial metacommunity organization in a highly-connected aquatic system. FEMS Microbiology Ecology 93: fiw225.

Vilmi, A., Tolonen, K.T., Karjalainen, S.M. & Heino, J. (2017) Metacommunity structuring in a highly-connected aquatic system: effects of dispersal, abiotic environment and grazing pressure on microalgal guilds. Hydrobiologia 790: 125-140.

Tolonen, K.T., Vilmi, A., Karjalainen, S.M., Hellsten, S., Sutela, T. & Heino, J. (2017) Ignoring spatial effects results in inadequate models for variation in littoral macroinvertebrate diversity. Oikos 126: 852–862.

Tolonen, K.E., Leinonen, K., Marttila, H., Erkinaro, J. & Heino, J. (2017) Environmental predictability of taxonomic and functional community composition in high-latitude streams. Freshwater Biology 62: 1-16.

Tolonen, K.E., Tokola, L., Grönroos, M., Hjort, J., Kärnä, O.-M., Erkinaro, J. & Heino, J. (2016) Hierarchical decomposition of trait patterns of macroinvertebrate communities in subarctic streams. Freshwater Science 35: 1032-1048.

Vilmi, A., Karjalainen, S.M., Hellsten, S. & Heino, J. (2016) Bioassessment in a metacommunity context: are diatom communities structured solely by species sorting? Ecological Indicators 62: 86-94.

Vilmi, A., Karjalainen, S.M., Kuoppala, M., Tolonen, K.T. & Heino, J. (2016) Taxonomic distinctness along nutrient gradients: more diverse, less diverse or not different from random? Ecological Indicators 61: 1033-1041.
Vilmi, A., Karjalainen, S.M., Nokela, T., Tolonen, K.T. & Heino, J. (2016) Unravelling the drivers of aquatic communities using disparate organismal groups and different taxonomic levels. Ecological Indicators 60: 108-118.

Vilmi, A., Karjalainen, S.M., Landeiro, V.L. & Heino, J. (2015) Freshwater diatoms as environmental indicators: evaluating the effects of eutrophication using species morphology and biological indices. Environmental Monitoring and Assessment 187: 243-252.